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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   osteopathia striata with cranial sclerosis
  

Disease ID 1015
Disease osteopathia striata with cranial sclerosis
Synonym
hyperostosis generalisata with striations
oscs
osteopathia striata cranial sclerosis
osteopathia striata with cranial sclerosis (disorder)
Orphanet
OMIM
UMLS
C0432268
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:3)
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:1)
139285  |  AMER1  |  CLINVAR;CTD_human;ORPHANET
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:1)
7046  |  TGFBR1  |  2.049  |  DISEASES
Locus(Waiting for update.)
Disease ID 1015
Disease osteopathia striata with cranial sclerosis
Integrated Phenotype
HPO | Name(Total Integrated Phenotypes:69)
HP:0000767  |  Funnel chest
HP:0000689  |  Misalignment of upper and lower dental arches
HP:0001611  |  Hypernasal speech
HP:0002023  |  Anal atresia
HP:0000239  |  Persistent wide fontanel
HP:0000465  |  Pterygium colli
HP:0005464  |  Craniofacial osteosclerosis
HP:0000347  |  Hypoplasia of mandible
HP:0000256  |  Macrocrania
HP:0001562  |  Oligohydramnios
HP:0002020  |  Heartburn
HP:0000316  |  Increased distance between eye sockets
HP:0001166  |  Long, slender fingers
HP:0000678  |  Dental crowding
HP:0001629  |  Ventricular septal defects
HP:0000396  |  Overfolded ears
HP:0001561  |  Hydramnios
HP:0000201  |  Pierre-robin deformity
HP:0002684  |  Thickened calvarium
HP:0000286  |  Palpebronasal fold
HP:0004322  |  Stature below 3rd percentile
HP:0005950  |  Laryngeal webs
HP:0004209  |  Clinodactyly of fifth digit
HP:0000369  |  Low-set ears
HP:0001762  |  Talipes equinovarus
HP:0003298  |  Spina bifida occulta
HP:0000204  |  Cleft upper lip
HP:0002007  |  Frontal protruberance
HP:0005619  |  Thoracolumbar kyphosis
HP:0000179  |  Plump lower lip
HP:0000175  |  Palatoschisis
HP:0000695  |  Natal teeth
HP:0001338  |  Partial agenesis of the corpus callosum
HP:0000358  |  Ear, posterior angulation, increased
HP:0002779  |  Tracheomalacia
HP:0005830  |  Flexion contracture of toe
HP:0000750  |  Late-onset speech development
HP:0001631  |  Atria septal defect
HP:0001252  |  Hypotonia
HP:0001250  |  Seizures
HP:0002694  |  Sclerosis of skull base
HP:0000003  |  Multicystic kidney dysplasia
HP:0009473  |  Joint contracture of the hand
HP:0001476  |  Late closure of the bregma sutures
HP:0006587  |  Straight collarbone
HP:0001643  |  Persistent ductus arteriosus
HP:0000218  |  Increased palatal height
HP:0010740  |  Osteopathia striata
HP:0003038  |  Hypoplastic fibula
HP:0001539  |  Omphalocele
HP:0000885  |  Wide ribs
HP:0001508  |  Weight faltering
HP:0002650  |  Scoliosis
HP:0002025  |  Narrowing of anal opening
HP:0002315  |  Headaches
HP:0000431  |  Broad nasal root
HP:0006610  |  Wide intermamillary distance
HP:0012385  |  Camptodactyly
HP:0000405  |  Conductive hearing loss
HP:0000341  |  Narrow bitemporal diameter
HP:0002566  |  Intestinal malrotation
HP:0000238  |  Nonsyndromal hydrocephalus
HP:0006784  |  Underdevelopment of paranasal sinus
HP:0000193  |  Uvula bifida
HP:0001256  |  Mild mental retardation
HP:0002990  |  Absent calf bone
HP:0002104  |  Absence of spontaneous respiration
HP:0008551  |  Hypoplasia of the external ear
HP:0010628  |  Facial palsy, unilateral or bilateral
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:4)
HP:0010740  |  Osteopathia striata  |  11
HP:0012393  |  Allergy  |  1
HP:0002664  |  Neoplasia  |  1
HP:0003006  |  Neuroblastoma  |  1
Disease ID 1015
Disease osteopathia striata with cranial sclerosis
Manually Symptom
UMLS  | Name(Total Manually Symptoms:1)
C0265673  |  kyphosis
Text Mined Symptom(Waiting for update.)
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:5)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs137852216NA139285AMER1umls:C0432268CLINVARNA0.441628651NAAMER1X64192230GA
rs137852217NA139285AMER1umls:C0432268CLINVARNA0.441628651NAAMER1X64192215GT,A
rs387906722NA139285AMER1umls:C0432268CLINVARNA0.441628651NAAMER1X64192858AT
rs387907269NA139285AMER1umls:C0432268CLINVARNA0.441628651NAAMER1X64192476GA
rs398122877NA139285AMER1umls:C0432268CLINVARNA0.441628651NAAMER1X64192020G-
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:28)
HP ID HP Name MP ID MP Name Annotation
HP:0000431Wide nasal bridgeMP:0006292abnormal nasal placode morphologyany structural anomaly in the paired ectodermal placodes that come to lie in the bottom of the olfactory pits as the pits are deepened by the growth of the surrounding medial and lateral nasal processes; the nasal placode gives rise to the olfactory epith
HP:0000179Thick lower lip vermilionMP:0005170cleft upper lipdefect in the upper lip where the maxillary prominence fails to merge with the merged medial nasal prominences
HP:0001643Patent ductus arteriosusMP:0011662persistent truncus arteriosus type iicomplete failure of the common arterial trunk opening out of both ventricles to divide into the aorta and pulmonary artery during development; type II is characterized by separate but proximate origins of the left and right pulmonary arterial branches fro
HP:0001476Delayed closure of the anterior fontanelleMP:0009886failure of palatal shelf elevationthe palatal shelves fail to move from a vertical position in the orofacial cavity to a horizontal apposition above the developing tongue
HP:0002694Sclerosis of skull baseMP:0011205excessive folding of visceral yolk sacthe appearance of wrinkles or folds on the surface of the visceral yolk sac
HP:0005619Thoracolumbar kyphosisMP:0000160kyphosisforward curvature of the spine, characterized by extensive flexion
HP:0006784Paranasal sinus hypoplasiaMP:0000694spleen hypoplasiaunderdevelopment or reduced size, usually due to a reduced cell number, in the spleen
HP:0001508Failure to thriveMP:0013294prenatal lethality prior to heart atrial septationdeath prior to the completion of heart atrial septation (Mus: E14.5-15.5)
HP:0000750Delayed speech and language developmentMP:0012251abnormal diaphragm developmentmalformation or incomplete differentiation of the thin musculomembranous barrier separating the abdominal and thoracic cavities and functioning in respiration
HP:0000689Dental malocclusionMP:0000120malocclusionperturbations in the normal patterned arrangement of the teeth or alignment of the jaw, resulting in the incorrect position of biting or chewing surfaces of the upper and lower teeth
HP:0000218High palateMP:0011615submucous cleft palatea cleft of the palate with cardinal signs including a bifid uvula, a V-shaped notch at the back of the hard palate, and/or a translucent line in the midline of the soft palate and a short palate
HP:0004209Clinodactyly of the 5th fingerMP:0011665d-loop transposition of the great arteriescomplete transposition of the great arteries; the d- refers to the dextroposition of the bulboventricular loop (ie, the position of the right ventricle, which is on the right side); in addition, the aorta also tends to be on the right and anterior, and th
HP:0000405Conductive hearing impairmentMP:0006325impaired hearingreduced ability to perceive auditory stimuli
HP:0001252Muscular hypotoniaMP:0004144hypotoniadecreased muscle tension resulting in limpness of the muscles in the resting state, not to be confused with weakness
HP:0009473Joint contracture of the handMP:0012129failure of blastocyst formationinability to form a blastocyst from a solid ball of cells known as a morula
HP:0005830Flexion contracture of toeMP:0010732abnormal node of Ranvier morphologyany structural anomaly of the short unmyelinated segments of an axon between myelinated segments, where voltage gated channels accumulate and regenerate an action potential as it is conducted along the axon
HP:0000003Multicystic kidney dysplasiaMP:0011376abnormal kidney corticomedullary boundary morphologyany structural anomaly of the region demarcating the renal medulla from the surrounding cortex; end-stage renal failure may be associated with loss of the normal corticomedullary boundary
HP:0000695Natal toothMP:0002100abnormal tooth morphologyatypical size, shape or hard tissue structure of the teeth
HP:0000175Cleft palateMP:0013550abnormal secondary palate morphology
HP:0003038Fibular hypoplasiaMP:0010881esophagus hypoplasiaunderdevelopment or decreased size of the esophagus, usually due a reduced number of cells
HP:0002023Anal atresiaMP:0006130pulmonary valve atresiacongenital closure of the pulmonary valve
HP:0003298Spina bifida occultaMP:0005297spina bifida occultadefective closure of the laminae of the vertebral column in the lumbosacral region without hernial protrusion of the spinal cord or meninges; the mildest, most common and often asymptomatic form of spina bifida, identified externally by a skin depression
HP:0001338Partial agenesis of the corpus callosumMP:0012129failure of blastocyst formationinability to form a blastocyst from a solid ball of cells known as a morula
HP:0001631Atria septal defectMP:0011667double outlet right ventricle with atrioventricular septal defecta form of DORV in which there is also a complete atrioventricular canal
HP:0001629Ventricular septal defectMP:0011667double outlet right ventricle with atrioventricular septal defecta form of DORV in which there is also a complete atrioventricular canal
HP:0000204Cleft upper lipMP:0005170cleft upper lipdefect in the upper lip where the maxillary prominence fails to merge with the merged medial nasal prominences
HP:0000885Broad ribsMP:0004676wide ribsan increase in the width of the bones forming the bony wall of the chest
HP:0005464Craniofacial osteosclerosisMP:0005422osteosclerosisabnormal hardening or eburnation (change in exposed subchondral bone in degenerative joint disease in which bone is converted into a dense substance with a smooth surface) of bone
Mapped by homologous gene(Total Items:69)
HP ID HP Name MP ID MP Name Annotation
HP:0001252Muscular hypotoniaMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0002650ScoliosisMP:0020309increased creatine kinase activityincreased ability of to catalyze the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H(+).
HP:0000695Natal toothMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000193Bifid uvulaMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001256Intellectual disability, mildMP:0020309increased creatine kinase activityincreased ability of to catalyze the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H(+).
HP:0005464Craniofacial osteosclerosisMP:0013640increased bone stiffnessincrease in material stiffness (N/mm) during elastic deformation
HP:0000689Dental malocclusionMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000396Overfolded helixMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001631Atria septal defectMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001250SeizuresMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0002315HeadacheMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0006610Wide intermamillary distanceMP:0014185cerebellum atrophyacquired diminution of the size of the cerebellum associated with wasting as from death and reabsorption of cells, diminished cellular proliferation, decreased cellular volume, pressure, ischemia, malnutrition, reduced function or malfunction, or hormonal
HP:0002566Intestinal malrotationMP:0014155absent olfactory epitheliumabsence of the epithelial cells that line the interior of the nose
HP:0008551MicrotiaMP:0020157abnormal behavioral response to alcoholany anomaly in the behavioral response induced by alcohol, such as induced hyperactivity or stereotypic behavior
HP:0001629Ventricular septal defectMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0004322Short statureMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0000238HydrocephalusMP:0020080increased bone mineralizationincrease in the rate at which minerals are deposited into bone
HP:0000347MicrognathiaMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0005950Laryngeal webMP:0011961abnormal cornea thicknessincreased or decreased width of the cornea in the center plane
HP:0002694Sclerosis of skull baseMP:0013781abnormal mammary gland luminal epithelium morphologyany structural anomaly of the inner cell layer of the mammary epithelium bilayer that lines the luminal surface of mammary gland ducts and alveoli; luminal cells have only limited contact with the underlying basement membrane and surrounding connective ti
HP:0000316HypertelorismMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0000003Multicystic kidney dysplasiaMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001508Failure to thriveMP:0020234decreased basal metabolismdecrease in heat production of an organism at the lowest level of cell chemistry in an inactive, awake, and fasting state
HP:0002023Anal atresiaMP:0020039increased bone ossificationincrease in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance
HP:0000204Cleft upper lipMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001539OmphaloceleMP:0020169increased thyroid gland weighthigher than average weight of the thyroid gland
HP:0000358Posteriorly rotated earsMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0005830Flexion contracture of toeMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0006587Straight claviclesMP:0013901absent female preputial glandabsence of the paired, lobulated, modified sebaceous glands located on the side of the clitoris in female rodents; in contrast to the preputial glands in male rodents, clitoral glands are a minor source of olfactory stimuli contributing to sexual attracti
HP:0001643Patent ductus arteriosusMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0012385CamptodactylyMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000405Conductive hearing impairmentMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0002104ApneaMP:0020187altered susceptibility to prion infectionaltered likelihood that an organism will develop ill effects from the small proteinaceous infectious particles which are resistant to inactivation by procedures that modify nucleic acids and which contain an abnormal isoform of a cellular protein that is
HP:0001561PolyhydramniosMP:0020214susceptible to malignant hyperthermiaincreased susceptibility to hyperthermia triggered by exposure to certain drugs used for general anesthesia, specifically the volatile anesthetic agents and the neuromuscular blocking agent, succinylcholine
HP:0000767Pectus excavatumMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0002779TracheomalaciaMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000175Cleft palateMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0001338Partial agenesis of the corpus callosumMP:0014185cerebellum atrophyacquired diminution of the size of the cerebellum associated with wasting as from death and reabsorption of cells, diminished cellular proliferation, decreased cellular volume, pressure, ischemia, malnutrition, reduced function or malfunction, or hormonal
HP:0001562OligohydramniosMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0005619Thoracolumbar kyphosisMP:0011967increased or absent threshold for auditory brainstem responseincrease in the value at which one or more sound frequencies or broadband clicks first elicits a recordable response generated by electrical activity of neurons in the ascending auditory system, or complete lack of a recordable response at any frequency o
HP:0001611Nasal speechMP:0020040decreased bone ossificationdecrease in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance
HP:0002020Gastroesophageal refluxMP:0014178increased brain apoptosisincrease in the number of cells of the brain undergoing programmed cell death
HP:0000286EpicanthusMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0000218High palateMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0010740Osteopathia striataMP:0011386increased metanephric mesenchyme apoptosisincrease in the number of cells of the metanephric mesenchyme (MM) undergoing programmed cell death; usually due to failure of MM cells to interact with the ureteric bud (UB) tips after UB invasion
HP:0003298Spina bifida occultaMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000179Thick lower lip vermilionMP:0020309increased creatine kinase activityincreased ability of to catalyze the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H(+).
HP:0001166ArachnodactylyMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0002025Anal stenosisMP:0014164abnormal ciliary process morphology any structural anomaly of any of the pigmented processes that radiate from the ciliary muscle and give attachments to ligaments supporting the lens of the eye; these processes increase in thickness as they advance from the orbiculus ciliaris to the exter
HP:0001762Talipes equinovarusMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000201Pierre-Robin sequenceMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0004209Clinodactyly of the 5th fingerMP:0020157abnormal behavioral response to alcoholany anomaly in the behavioral response induced by alcohol, such as induced hyperactivity or stereotypic behavior
HP:0000885Broad ribsMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0000678Dental crowdingMP:0020309increased creatine kinase activityincreased ability of to catalyze the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H(+).
HP:0006784Paranasal sinus hypoplasiaMP:0011386increased metanephric mesenchyme apoptosisincrease in the number of cells of the metanephric mesenchyme (MM) undergoing programmed cell death; usually due to failure of MM cells to interact with the ureteric bud (UB) tips after UB invasion
HP:0010628Facial palsyMP:0020240increased skeletal muscle cell apoptosisincrease in the number of skeletal muscle cells undergoing programmed cell death
HP:0000750Delayed speech and language developmentMP:0020309increased creatine kinase activityincreased ability of to catalyze the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H(+).
HP:0000369Low-set earsMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0000256MacrocephalyMP:0020309increased creatine kinase activityincreased ability of to catalyze the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H(+).
HP:0003038Fibular hypoplasiaMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0002684Thickened calvariaMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000465Webbed neckMP:0020039increased bone ossificationincrease in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance
HP:0000341Narrow foreheadMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0002007Frontal bossingMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0002990Fibular aplasiaMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000431Wide nasal bridgeMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001476Delayed closure of the anterior fontanelleMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000239Large fontanellesMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0009473Joint contracture of the handMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
Disease ID 1015
Disease osteopathia striata with cranial sclerosis
Case(Waiting for update.)